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paleobiology-mcp-server

Search fossil occurrences, resolve taxon fossil ranges, plot diversity through deep time, and look up the geologic time scale via MCP. STDIO or Streamable HTTP.

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What's in it

Data offered docs-verified
fossil occurrences (PBDB) · taxon fossil ranges (FAD/LAD) · diversity, origination and extinction curves through geologic time · geologic time scale intervals (named intervals to Ma boundaries) · fossil collections (localities) · bibliographic references for occurrence and collection records
Coverage llm-inferred
Global · roughly 540 million years
Formats docs-verified
MCP stdio · MCP streamable HTTP
Access docs-verified
Free and open. No API key; no auth by default (MCP_AUTH_MODE defaults to none). Server licence Apache-2.0. Resource records carry CC BY 4.0 attribution.

Useful for

Use cases llm-inferred
Palaeontological and geological desk-study screening: fossil occurrences and formations near a proposed site · Dating geological strata for ground investigation scoping by resolving formation and interval ages from the ICS scale · Resolving accepted taxon names and fossil ranges to support ecological or heritage constraint reports
Audience llm-inferred
geologists · palaeontologists · geotechnical engineers · environmental consultants · ecologists

Limitations

Constraints docs-verified
Diversity counts reflect sampling and collection effort, not true past diversity · PBDB accepted taxonomy may differ from the searched name or other taxonomic backbones · Per-call limits: up to 500 records served per call; each response capped at 100,000 bytes · Spill to SQL needs DataCanvas (CANVAS_PROVIDER_TYPE=duckdb); without it, overflowing pages are cut at a next offset · Dataframe tools exist only when DataCanvas is on; the drop tool also needs PALEOBIOLOGY_DATAFRAME_DROP_ENABLED=true · Catalogue tool list omits paleobiology_search_occurrences, which the DOCS list as a core tool · Catalogue auth field says OAuth; DOCS say no auth by default, with OAuth only as an optional server auth mode · Relies on upstream PBDB API availability; no uptime or rate-limit information in DOCS
Licence
Apache-2.0
Authentication
OAuth mentioned in README (auto-extracted)
GitHub stars
2
Last commit
15/10/2026
Last successful page check
14/10/2026
Page health
healthy
Package
Not recorded
Verification
Not independently verified

Auto-extracted, unverified fields: tools, install, auth. Check upstream documentation.

Provenance & evidence

Daily discovery 2026-10-16: GitHub search; verified via GitHub API. Tools/install/auth auto-extracted from README.

Metadata observed 14/10/2026 · daily-2026-10-16 (github-search)